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RIKEN DNA Bank Human Resource - ATG13

Gene ID NCBI Gene 9776 |  KEGG hsa:9776
Gene Symbol ATG13
Protein Name autophagy related 13
Synonyms KIAA0652|PARATARG8
Featured content Autophagy (human)
Ortholog resource in our bank

  ATG13

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB19625 pMXs-IP-EGFP-hATG13 Retroviral vector for stable expression of human ATG13 with N-terminal EGFP.
RDB19770 pEGFP-C1-hAtg13 Transient expression vector of human Atg13 with N-terminal EGFP.
RDB19771 p3xFLAG-CMV10-hAtg13 Transient expression vector of human Atg13 with N-terminal 3×FLAG.
RDB19802 pCI-neo-HA-hAtg13 Expression vector of human Atg13 with N-terminal HA.

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX001610 IRAK004A10 pCMV-SPORT6 BC001331 NM_014741 Full
HGY080675 IRAL001L11 pOTB7 BC002378 NM_014741
HGY085878 IRAL014L14 pOTB7 BC006191 NM_014741 Partial

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024Jan15.csv
GNP_full_IRAL_2023Jun29.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE099602 M01C049A02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099650 M01C049C02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099698 M01C049E02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099746 M01C049G02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099794 M01C049I02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099842 M01C049K02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099890 M01C049M02 pDONR221 MGC14-B01 BC002378 NM_014741  
HGE099938 M01C049O02 pDONR221 MGC14-B01 BC002378 NM_014741  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR247362 ARiS118G18 pGCAP10 NM_014741.2  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2024.04.03

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl